BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030784

Symbol
LOC655110

Product
D-2-hydroxyglutarate dehydrogenase, mitochondrial-like Protein

NCBI Equivalent
655110

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.7 ± 0.1	0.5	0.3 ± 0.1	0.0
Brain	0.1 ± 0.1	0.0	0.1 ± 0.0	0.0
Anterior Midgut	0.9 ± 0.2	0.2	3.2 ± 0.8	0.5
Posterior Midgut	1.5 ± 0.1	0.3	5.4 ± 1.1	0.8
Hindgut	2.9 ± 1.2	0.5	5.0 ± 0.6	0.7
Tubules (Free)	22 ± 2.0	4.2	17 ± 1.3	2.4
Perirectal Tubules	1.8 ± 0.4	0.3
Rectum	4.2 ± 0.9	0.8
Rectal complex	2.5 ± 0.5	0.5	2.7 ± 0.1	0.4
Fat Body	5.9 ± 2.3	1.1	22 ± 18	3.2
Male Gonads	0.3 ± 0.1	0.1
Female Gonads	0.4 ± 0.1	0.1
Carcass	4.0 ± 3.9	0.7	1.9 ± 1.3	0.3

Whole Body	5.4 ± 1.8		7.0 ± 4.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030784-RA
TC030784-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030784	1.1 ± 0.2	0.5 ± 0.1	0.7 ± 0.1	0.9 ± 0.2

TC030784-RA	1.0 ± 0.1	0.4 ± 0.1	0.5 ± 0.0	0.8 ± 0.1
TC030784-RB	0.1 ± 0.1	0.1 ± 0.0	0.2 ± 0.1	0.2 ± 0.1