BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030879

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	23 ± 6.9	2.7	11 ± 2.0	0.5
Brain	7.5 ± 0.4	0.9	5.2 ± 0.7	0.2
Anterior Midgut	13 ± 2.1	1.5	20 ± 5.9	0.9
Posterior Midgut	12 ± 2.3	1.4	19 ± 2.7	0.9
Hindgut	4.8 ± 1.2	0.6	6.6 ± 0.9	0.3
Tubules (Free)	6.5 ± 1.2	0.8	9.0 ± 0.4	0.4
Perirectal Tubules	9.3 ± 1.8	1.1
Rectum	13 ± 2.9	1.5
Rectal complex	12 ± 0.9	1.4	9.2 ± 0.5	0.4
Fat Body	23 ± 23	2.6	45 ± 29	2.1
Male Gonads	1.7 ± 0.6	0.2
Female Gonads	7.4 ± 2.3	0.9
Carcass	44 ± 8.1	5.1	10 ± 2.0	0.5

Whole Body	8.6 ± 2.4		21 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030879-RA
TC030879-RB
TC030879-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030879	2.7 ± 0.3	1.3 ± 0.5	1.5 ± 0.4	1.8 ± 0.4

TC030879-RA	0.3 ± 0.1	0.4 ± 0.2	0.4 ± 0.3	0.6 ± 0.1
TC030879-RB	1.8 ± 0.3	0.4 ± 0.1	0.2 ± 0.2	0.4 ± 0.6
TC030879-RC	0.5 ± 0.0	0.5 ± 0.4	0.9 ± 0.3	0.8 ± 0.2