BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030897

Symbol
LOC100142597

NCBI Equivalent
100142597

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.5 ± 0.3	1.4	2.8 ± 0.3	1.1
Brain	3.0 ± 0.1	1.2	3.0 ± 0.2	1.2
Anterior Midgut	2.7 ± 0.3	1.1	3.0 ± 0.1	1.2
Posterior Midgut	2.4 ± 0.1	1.0	2.7 ± 0.3	1.1
Hindgut	2.3 ± 0.3	0.9	2.5 ± 0.4	1.0
Tubules (Free)	2.8 ± 0.3	1.1	3.4 ± 0.3	1.4
Perirectal Tubules	2.6 ± 0.3	1.1
Rectum	2.7 ± 0.1	1.1
Rectal complex	3.3 ± 0.5	1.4	3.0 ± 0.1	1.2
Fat Body	2.0 ± 0.6	0.8	1.4 ± 0.3	0.6
Male Gonads	2.9 ± 0.2	1.2
Female Gonads	8.4 ± 1.5	3.4
Carcass	1.6 ± 0.2	0.6	2.0 ± 0.7	0.8

Whole Body	2.5 ± 1.0		2.5 ± 0.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030897-RA
TC030897-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030897	11 ± 0.3	7.5 ± 0.6	6.4 ± 0.1	3.7 ± 0.5

TC030897-RA	8.6 ± 0.2	4.8 ± 1.0	3.3 ± 0.7	2.3 ± 0.5
TC030897-RB	2.4 ± 0.2	2.7 ± 0.3	3.1 ± 0.6	1.4 ± 0.3