BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030901

Symbol
LOC655167

Product
Protein takeout-like Protein

NCBI Equivalent
655167

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	286 ± 15	7.5	826 ± 398	0.7
Brain	1.9 ± 0.3	0.0	290 ± 156	0.2
Anterior Midgut	4.7 ± 2.8	0.1	11 ± 7.5	0.0
Posterior Midgut	3.7 ± 1.2	0.1	5.6 ± 3.8	0.0
Hindgut	75 ± 53	2.0	372 ± 196	0.3
Tubules (Free)	0.1 ± 0.1	0.0	4.0 ± 2.2	0.0
Perirectal Tubules	81 ± 99	2.1
Rectum	210 ± 35	5.5
Rectal complex	350 ± 74	9.2	463 ± 202	0.4
Fat Body	1.2 ± 0.2	0.0	3289 ± 3945	2.7
Male Gonads	15 ± 13	0.4
Female Gonads	0.6 ± 0.8	0.0
Carcass	3376 ± 1750	89	55390 ± 28803	45

Whole Body	38 ± 5.0		1240 ± 273

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030901-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030901	0.4 ± 0.5	3.8 ± 0.6	33 ± 2.7	5.9 ± 1.4

TC030901-RA	0.4 ± 0.5	3.8 ± 0.6	33 ± 2.7	5.9 ± 1.4