BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC030965

Symbol
LOC656988

NCBI Equivalent
656988

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	120 ± 8.6	3.0	367 ± 85	2.0
Brain	1.1 ± 0.1	0.0	7.0 ± 2.5	0.0
Anterior Midgut	16 ± 4.3	0.4	26 ± 3.8	0.1
Posterior Midgut	20 ± 4.7	0.5	13 ± 2.0	0.1
Hindgut	220 ± 97	5.6	196 ± 85	1.1
Tubules (Free)	2.8 ± 0.6	0.1	13 ± 2.2	0.1
Perirectal Tubules	19 ± 18	0.5
Rectum	70 ± 9.1	1.8
Rectal complex	90 ± 2.7	2.3	50 ± 1.6	0.3
Fat Body	14 ± 2.9	0.4	0.6 ± 0.6	0.0
Male Gonads	13 ± 1.0	0.3
Female Gonads	2.1 ± 1.6	0.1
Carcass	732 ± 147	18	5560 ± 568	30

Whole Body	40 ± 2.4		183 ± 83

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC030965-RA
TC030965-RB
TC030965-RC
TC030965-RD
TC030965-RE

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC030965	0.9 ± 0.4	1.5 ± 0.2	1.3 ± 0.3	145 ± 30

TC030965-RA	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.3 ± 0.3
TC030965-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.9 ± 0.1
TC030965-RC	0.8 ± 0.4	1.4 ± 0.1	1.2 ± 0.2	141 ± 29
TC030965-RD	0.0 ± 0.0	0.0 ± 0.1	0.0 ± 0.0	2.3 ± 0.9
TC030965-RE	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.0 ± 0.0