BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031001

Symbol
LOC661711

Product
Sterile alpha motif domain-containing protein 5-like Protein

NCBI Equivalent
661711

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.1 ± 0.1	0.9	2.8 ± 0.1	1.0
Brain	3.2 ± 0.0	0.9	3.4 ± 0.5	1.2
Anterior Midgut	0.4 ± 0.1	0.1	1.2 ± 0.3	0.4
Posterior Midgut	0.5 ± 0.2	0.1	1.0 ± 0.4	0.4
Hindgut	1.8 ± 0.5	0.5	1.5 ± 0.1	0.6
Tubules (Free)	0.4 ± 0.1	0.1	0.2 ± 0.0	0.1
Perirectal Tubules	26 ± 8.9	7.2
Rectum	5.8 ± 0.2	1.6
Rectal complex	9.8 ± 1.4	2.7	7.9 ± 0.9	2.9
Fat Body	2.5 ± 0.3	0.7	1.3 ± 0.5	0.5
Male Gonads	2.9 ± 0.5	0.8
Female Gonads	0.6 ± 0.3	0.2
Carcass	1.2 ± 0.3	0.3	1.2 ± 0.2	0.5

Whole Body	3.7 ± 0.5		2.7 ± 0.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031001-RA
TC031001-RB
TC031001-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031001	0.9 ± 0.2	19 ± 4.8	24 ± 3.6	15 ± 1.5

TC031001-RA	0.3 ± 0.0	0.9 ± 0.2	1.5 ± 0.3	2.1 ± 0.6
TC031001-RB	0.7 ± 0.2	18 ± 4.6	22 ± 3.4	13 ± 2.1
TC031001-RC	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0