BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY show

Gene ID
TC031003

Symbol
LOC662395

iBeetle-Base
TC031003

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.3 ± 0.8	0.9	14 ± 3.0	0.7
Brain	8.0 ± 0.1	0.7	8.9 ± 0.9	0.5
Anterior Midgut	27 ± 2.5	2.4	30 ± 1.1	1.6
Posterior Midgut	35 ± 2.4	3.2	37 ± 2.2	2.0
Hindgut	12 ± 0.8	1.1	16 ± 2.4	0.8
Tubule	20 ± 0.6	1.8	19 ± 0.5	1.0
Perirectal Tubules	7.9 ± 1.3	0.7
Rectal complex	11 ± 1.1	1.0	12 ± 1.0	0.7
Rectum	11 ± 1.3	1.0
Fat Body	56 ± 19	5.2	12 ± 0.9	0.6
Male Gonads	9.3 ± 0.8	0.9
Female Gonads	13 ± 0.7	1.2
Carcass	15 ± 5.8	1.4	16 ± 2.0	0.8

Whole Body	11 ± 0.9		19 ± 4.0

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031003-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031003	19 ± 1.3	14 ± 0.2	23 ± 2.8	29 ± 5.4

TC031003-RA	19 ± 1.3	14 ± 0.2	23 ± 2.8	29 ± 5.4