BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031004

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 2.2	0.2	0.2 ± 0.2	0.0
Brain	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Anterior Midgut	1347 ± 180	80	1654 ± 398	41
Posterior Midgut	910 ± 116	54	1218 ± 169	30
Hindgut	1.0 ± 0.3	0.1	0.3 ± 0.1	0.0
Tubules (Free)	28 ± 2.7	1.7	24 ± 6.6	0.6
Perirectal Tubules	0.8 ± 0.2	0.1
Rectum	0.1 ± 0.0	0.0
Rectal complex	0.8 ± 0.5	0.0	1.1 ± 0.8	0.0
Fat Body	45 ± 17	2.6	0.5 ± 0.2	0.0
Male Gonads	0.5 ± 0.3	0.0
Female Gonads	0.3 ± 0.3	0.0
Carcass	0.6 ± 0.6	0.0	0.6 ± 0.3	0.0

Whole Body	17 ± 2.8		40 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031004-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031004	0.1 ± 0.1	0.9 ± 0.1	0.1 ± 0.1	0.6 ± 0.4

TC031004-RA	0.1 ± 0.1	0.9 ± 0.1	0.1 ± 0.1	0.6 ± 0.4