BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031397

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	16 ± 1.5	3.7	28 ± 5.6	2.8
Brain	23 ± 0.5	5.4	15 ± 2.5	1.5
Anterior Midgut	7.6 ± 0.8	1.8	7.9 ± 0.8	0.8
Posterior Midgut	7.4 ± 0.9	1.7	8.2 ± 0.8	0.8
Hindgut	34 ± 14	7.9	32 ± 8.0	3.2
Tubules (Free)	2.9 ± 0.3	0.7	3.0 ± 0.3	0.3
Perirectal Tubules	28 ± 5.0	6.5
Rectum	31 ± 4.0	7.4
Rectal complex	32 ± 2.3	7.6	15 ± 0.4	1.5
Fat Body	6.6 ± 2.0	1.6	14 ± 7.2	1.3
Male Gonads	1.9 ± 0.9	0.5
Female Gonads	0.8 ± 0.4	0.2
Carcass	27 ± 10	6.3	32 ± 11	3.2

Whole Body	4.2 ± 0.4		10 ± 6.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031397-RA
TC031397-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031397	0.4 ± 0.0	0.6 ± 0.0	0.5 ± 0.1	4.8 ± 1.4

TC031397-RA	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	1.5 ± 0.6
TC031397-RB	0.4 ± 0.0	0.5 ± 0.1	0.5 ± 0.1	3.3 ± 1.3