BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031473

Symbol
Uba1

Product
Ubiquitin-like modifier-activating enzyme 1

NCBI Equivalent
657621

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	31 ± 1.8	0.7	52 ± 5.6	1.5
Brain	45 ± 0.7	1.0	52 ± 1.8	1.5
Anterior Midgut	68 ± 5.0	1.5	57 ± 7.6	1.6
Posterior Midgut	68 ± 6.6	1.5	52 ± 2.6	1.5
Hindgut	21 ± 5.2	0.5	47 ± 1.2	1.3
Tubules (Free)	39 ± 1.8	0.9	49 ± 1.6	1.4
Perirectal Tubules	28 ± 1.4	0.6
Rectum	27 ± 2.2	0.6
Rectal complex	22 ± 1.0	0.5	31 ± 5.1	0.9
Fat Body	43 ± 5.2	1.0	31 ± 12	0.9
Male Gonads	48 ± 10	1.1
Female Gonads	42 ± 1.9	0.9
Carcass	58 ± 18	1.3	39 ± 19	1.1

Whole Body	45 ± 3.3		36 ± 11

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031473-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031473	7.4 ± 0.7	4.5 ± 0.8	6.2 ± 0.5	7.4 ± 4.1

TC031473-RA	7.4 ± 0.7	4.5 ± 0.8	6.2 ± 0.5	7.4 ± 4.1