BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031499

Symbol
orb2

Product
Probable RNA-binding protein orb2-like Protein

NCBI Equivalent
657803

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	18 ± 3.6	1.9	15 ± 2.8	1.2
Brain	41 ± 5.6	4.3	12 ± 1.4	1.0
Anterior Midgut	33 ± 2.7	3.4	14 ± 2.3	1.2
Posterior Midgut	34 ± 3.6	3.5	14 ± 1.8	1.1
Hindgut	61 ± 30	6.3	119 ± 12	9.6
Tubules (Free)	28 ± 0.3	2.9	30 ± 1.6	2.5
Perirectal Tubules	82 ± 13	8.4
Rectum	62 ± 4.1	6.4
Rectal complex	40 ± 5.6	4.1	24 ± 1.6	1.9
Fat Body	11 ± 6.6	1.1	35 ± 13	2.8
Male Gonads	2.2 ± 0.1	0.2
Female Gonads	11 ± 3.4	1.1
Carcass	30 ± 15	3.1	13 ± 3.4	1.1

Whole Body	9.7 ± 1.6		12 ± 2.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031499-RA
TC031499-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031499	3.3 ± 0.1	2.6 ± 0.2	4.0 ± 0.3	7.4 ± 2.0

TC031499-RA	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	2.6 ± 1.9
TC031499-RB	3.3 ± 0.1	2.5 ± 0.2	4.0 ± 0.3	4.8 ± 0.6