BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031808

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	14 ± 1.2	3.0	9.5 ± 2.9	1.6
Brain	4.0 ± 0.4	0.9	5.2 ± 1.0	0.9
Anterior Midgut	2.9 ± 0.6	0.6	3.4 ± 0.5	0.6
Posterior Midgut	3.4 ± 0.8	0.7	2.4 ± 0.4	0.4
Hindgut	26 ± 8.1	5.5	24 ± 9.5	4.1
Tubules (Free)	2.6 ± 0.3	0.6	1.3 ± 0.0	0.2
Perirectal Tubules	3.8 ± 2.8	0.8
Rectum	17 ± 1.8	3.6
Rectal complex	7.9 ± 0.6	1.7	5.1 ± 0.5	0.9
Fat Body	1.3 ± 0.7	0.3	0.5 ± 0.4	0.1
Male Gonads	4.5 ± 1.0	0.9
Female Gonads	0.6 ± 0.2	0.1
Carcass	50 ± 1.5	11	164 ± 39	28

Whole Body	4.7 ± 0.7		5.9 ± 0.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031808-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031808	0.9 ± 0.1	0.4 ± 0.1	3.1 ± 0.5	14 ± 5.3

TC031808-RA	0.9 ± 0.1	0.4 ± 0.1	3.1 ± 0.5	14 ± 5.3