BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC031836

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.4 ± 0.2	0.7	11 ± 2.7	1.5
Brain	4.2 ± 0.3	0.5	6.3 ± 0.3	0.9
Anterior Midgut	13 ± 1.6	1.6	7.3 ± 1.1	1.0
Posterior Midgut	11 ± 0.9	1.4	6.6 ± 1.1	0.9
Hindgut	4.6 ± 1.1	0.6	6.2 ± 0.8	0.8
Tubules (Free)	7.9 ± 1.6	1.0	5.7 ± 0.3	0.8
Perirectal Tubules	4.7 ± 0.7	0.6
Rectum	5.6 ± 0.3	0.7
Rectal complex	6.6 ± 1.1	0.8	6.9 ± 2.0	0.9
Fat Body	5.5 ± 0.8	0.7	4.5 ± 0.8	0.6
Male Gonads	6.2 ± 3.2	0.8
Female Gonads	4.8 ± 0.4	0.6
Carcass	5.9 ± 1.2	0.7	4.6 ± 1.0	0.6

Whole Body	8.0 ± 0.8		7.3 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC031836-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC031836	3.5 ± 0.9	5.7 ± 1.0	4.4 ± 0.7	3.6 ± 1.7

TC031836-RA	3.5 ± 0.9	5.7 ± 1.0	4.4 ± 0.7	3.6 ± 1.7