BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032220

Symbol
LOC658997

Product
Post-GPI attachment to proteins factor 2-like

NCBI Equivalent
658997

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	8.0 ± 0.6	1.9	5.1 ± 0.7	0.9
Brain	33 ± 4.2	7.9	25 ± 0.6	4.5
Anterior Midgut	3.7 ± 0.3	0.9	4.1 ± 0.4	0.7
Posterior Midgut	3.2 ± 0.4	0.8	4.7 ± 0.8	0.9
Hindgut	5.4 ± 3.3	1.3	5.3 ± 0.6	1.0
Tubules (Free)	3.6 ± 0.7	0.9	4.5 ± 0.2	0.8
Perirectal Tubules	3.6 ± 0.2	0.9
Rectum	4.3 ± 0.4	1.0
Rectal complex	2.4 ± 0.6	0.6	3.6 ± 0.3	0.6
Fat Body	9.4 ± 0.2	2.2	15 ± 5.8	2.8
Male Gonads	4.0 ± 0.5	1.0
Female Gonads	9.6 ± 0.8	2.3
Carcass	4.8 ± 0.9	1.2	7.7 ± 0.9	1.4

Whole Body	4.2 ± 0.4		5.5 ± 2.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032220-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032220	12 ± 0.9	7.8 ± 0.8	7.6 ± 0.4	7.4 ± 2.0

TC032220-RA	12 ± 0.9	7.8 ± 0.8	7.6 ± 0.4	7.4 ± 2.0