BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032380

Symbol
LOC661253

Product
Peptide transporter family 1-like Protein

NCBI Equivalent
661253

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	22 ± 2.1	2.2	41 ± 14	2.2
Brain	1.6 ± 0.3	0.2	1.0 ± 0.4	0.1
Anterior Midgut	1.8 ± 0.6	0.2	4.6 ± 1.8	0.2
Posterior Midgut	62 ± 19	6.3	131 ± 48	6.9
Hindgut	18 ± 7.1	1.8	17 ± 1.4	0.9
Tubules (Free)	38 ± 3.6	3.8	37 ± 2.2	2.0
Perirectal Tubules	2.6 ± 2.2	0.3
Rectum	13 ± 0.7	1.3
Rectal complex	10.0 ± 1.9	1.0	11 ± 4.0	0.6
Fat Body	14 ± 4.4	1.4	1.5 ± 1.2	0.1
Male Gonads	1.2 ± 0.7	0.1
Female Gonads	1.1 ± 0.8	0.1
Carcass	17 ± 10	1.7	11 ± 1.2	0.6

Whole Body	9.9 ± 1.0		19 ± 2.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032380-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032380	1.0 ± 0.3	0.3 ± 0.1	0.1 ± 0.1	0.3 ± 0.1

TC032380-RA	1.0 ± 0.3	0.3 ± 0.1	0.1 ± 0.1	0.3 ± 0.1