BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032637

Symbol
LOC656340

NCBI Equivalent
656340

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.1 ± 0.3	3.0	3.9 ± 0.5	1.2
Brain	13 ± 0.6	6.3	13 ± 0.8	4.1
Anterior Midgut	3.0 ± 0.1	1.5	3.5 ± 0.6	1.1
Posterior Midgut	3.0 ± 0.2	1.5	3.8 ± 0.3	1.2
Hindgut	3.1 ± 1.1	1.5	3.6 ± 1.3	1.2
Tubules (Free)	3.0 ± 0.5	1.4	3.1 ± 0.2	1.0
Perirectal Tubules	3.0 ± 1.1	1.5
Rectum	5.2 ± 0.6	2.5
Rectal complex	4.2 ± 0.2	2.0	3.8 ± 0.4	1.2
Fat Body	2.0 ± 0.5	1.0	1.7 ± 0.3	0.6
Male Gonads	0.9 ± 0.0	0.5
Female Gonads	1.5 ± 0.3	0.7
Carcass	2.8 ± 0.3	1.4	2.2 ± 0.2	0.7

Whole Body	2.1 ± 0.4		3.1 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032637-RA
TC032637-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032637	4.3 ± 0.3	4.4 ± 0.1	6.0 ± 0.8	6.3 ± 0.2

TC032637-RA	0.4 ± 0.1	1.1 ± 0.1	2.2 ± 0.4	4.1 ± 0.1
TC032637-RB	3.8 ± 0.5	3.3 ± 0.1	3.8 ± 1.1	2.2 ± 0.3