BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032646

Symbol
trc

Product
Serine/threonine-protein kinase tricorner-like Protein

NCBI Equivalent
655192

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	44 ± 2.6	1.6	35 ± 10	1.3
Brain	119 ± 7.8	4.3	55 ± 9.3	2.1
Anterior Midgut	27 ± 1.7	1.0	29 ± 6.3	1.1
Posterior Midgut	29 ± 7.6	1.1	29 ± 5.3	1.1
Hindgut	23 ± 7.3	0.8	31 ± 5.6	1.2
Tubules (Free)	11 ± 0.8	0.4	11 ± 0.9	0.4
Perirectal Tubules	22 ± 1.2	0.8
Rectum	24 ± 0.8	0.9
Rectal complex	20 ± 3.7	0.7	18 ± 2.5	0.7
Fat Body	45 ± 16	1.6	40 ± 11	1.5
Male Gonads	56 ± 4.6	2.0
Female Gonads	44 ± 16	1.6
Carcass	72 ± 24	2.6	128 ± 55	4.9

Whole Body	28 ± 1.9		26 ± 4.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032646-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032646	7.1 ± 0.7	4.9 ± 0.5	2.0 ± 0.1	3.0 ± 1.1

TC032646-RA	7.1 ± 0.7	4.9 ± 0.5	2.0 ± 0.1	3.0 ± 1.1