BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032700

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.4 ± 0.2	0.0	0.4 ± 0.2	0.0
Brain	0.1 ± 0.0	0.0	13 ± 10	0.3
Anterior Midgut	1.7 ± 0.4	0.1	1.4 ± 0.3	0.0
Posterior Midgut	4.4 ± 4.0	0.3	12 ± 3.6	0.2
Hindgut	n.a.	n.a.	13993 ± 11945	273
Tubules (Free)	0.6 ± 0.1	0.0	0.5 ± 0.2	0.0
Perirectal Tubules	212 ± 344	12
Rectum	1717 ± 354	101
Rectal complex	859 ± 42	50	891 ± 294	17
Fat Body	0.8 ± 0.5	0.0	1.2 ± 0.1	0.0
Male Gonads	0.3 ± 0.2	0.0
Female Gonads	0.5 ± 0.1	0.0
Carcass	8.0 ± 6.3	0.5	5.7 ± 9.0	0.1

Whole Body	17 ± 2.0		51 ± 25

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032700-RA
TC032700-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032700	1.0 ± 0.2	0.9 ± 0.2	0.5 ± 0.1	0.3 ± 0.2

TC032700-RA	0.1 ± 0.0	0.2 ± 0.1	0.1 ± 0.1	0.1 ± 0.1
TC032700-RB	0.9 ± 0.2	0.7 ± 0.2	0.4 ± 0.1	0.2 ± 0.1