BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC032933

Symbol
LOC661370

NCBI Equivalent
661370

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.4 ± 0.8	0.0	4.6 ± 3.5	0.0
Brain	0.1 ± 0.1	0.0	0.7 ± 0.9	0.0
Anterior Midgut	2.6 ± 0.5	0.0	25 ± 12	0.0
Posterior Midgut	126 ± 41	0.8	408 ± 222	0.4
Hindgut	104 ± 132	0.6	44 ± 30	0.0
Tubules (Free)	16284 ± 1598	100	22926 ± 735	20
Perirectal Tubules	16 ± 11	0.1
Rectum	0.8 ± 1.1	0.0
Rectal complex	18 ± 6.0	0.1	66 ± 24	0.1
Fat Body	117 ± 92	0.7	830 ± 526	0.7
Male Gonads	26 ± 25	0.2
Female Gonads	4.3 ± 2.7	0.0
Carcass	55 ± 94	0.3	131 ± 109	0.1

Whole Body	163 ± 11		1128 ± 975

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC032933-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC032933	2.9 ± 3.0	3.5 ± 2.7	3.1 ± 1.0	1364 ± 451

TC032933-RA	2.9 ± 3.0	3.5 ± 2.7	3.1 ± 1.0	1364 ± 451