BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033159

Symbol
LOC100142081

NCBI Equivalent
100142081

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.3 ± 0.8	0.6	4.2 ± 1.3	1.5
Brain	1.6 ± 0.2	0.2	1.7 ± 0.2	0.6
Anterior Midgut	0.6 ± 0.1	0.1	0.8 ± 0.3	0.3
Posterior Midgut	0.6 ± 0.2	0.1	1.0 ± 0.1	0.4
Hindgut	1.4 ± 0.4	0.1	2.1 ± 0.7	0.8
Tubules (Free)	2.8 ± 0.2	0.3	2.5 ± 0.2	0.9
Perirectal Tubules	5.7 ± 0.2	0.6
Rectum	7.2 ± 0.7	0.7
Rectal complex	7.8 ± 0.7	0.8	5.0 ± 1.0	1.9
Fat Body	3.0 ± 0.5	0.3	0.5 ± 0.1	0.2
Male Gonads	4.3 ± 1.4	0.4
Female Gonads	0.8 ± 0.2	0.1
Carcass	2.4 ± 1.0	0.2	1.4 ± 0.7	0.5

Whole Body	9.8 ± 1.5		2.7 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033159-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033159	1.5 ± 0.2	1.4 ± 0.2	1.4 ± 0.2	0.8 ± 0.1

TC033159-RA	1.5 ± 0.2	1.4 ± 0.2	1.4 ± 0.2	0.8 ± 0.1