BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033217

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	75 ± 4.8	1.9	43 ± 23	0.8
Brain	65 ± 2.0	1.6	44 ± 4.8	0.8
Anterior Midgut	30 ± 1.6	0.8	45 ± 6.6	0.8
Posterior Midgut	40 ± 6.1	1.0	60 ± 8.8	1.1
Hindgut	215 ± 138	5.5	221 ± 56	4.0
Tubules (Free)	77 ± 15	2.0	61 ± 2.8	1.1
Perirectal Tubules	154 ± 8.5	3.9
Rectum	142 ± 11	3.6
Rectal complex	112 ± 20	2.8	92 ± 7.8	1.7
Fat Body	24 ± 7.8	0.6	130 ± 116	2.4
Male Gonads	36 ± 2.7	0.9
Female Gonads	25 ± 3.7	0.6
Carcass	94 ± 29	2.4	111 ± 42	2.0

Whole Body	39 ± 0.8		55 ± 6.1

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033217-RA
TC033217-RB
TC033217-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033217	6.5 ± 1.2	3.5 ± 0.3	3.6 ± 0.3	5.1 ± 1.9

TC033217-RA	6.5 ± 1.2	3.5 ± 0.3	3.6 ± 0.3	5.0 ± 1.9
TC033217-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1
TC033217-RC	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0