BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033318

Symbol
LOC103313308

NCBI Equivalent
103313308

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.0 ± 0.4	1.0	4.6 ± 0.5	1.1
Brain	4.9 ± 0.4	1.3	4.3 ± 0.2	1.0
Anterior Midgut	5.1 ± 0.2	1.3	5.6 ± 0.1	1.3
Posterior Midgut	4.7 ± 1.0	1.2	6.4 ± 0.5	1.5
Hindgut	4.3 ± 0.9	1.1	6.0 ± 0.3	1.4
Tubules (Free)	5.8 ± 1.2	1.5	7.3 ± 0.4	1.7
Perirectal Tubules	5.8 ± 0.6	1.5
Rectum	6.3 ± 0.2	1.7
Rectal complex	5.6 ± 0.1	1.5	5.8 ± 0.3	1.4
Fat Body	4.7 ± 0.4	1.2	4.6 ± 1.7	1.1
Male Gonads	5.2 ± 1.3	1.4
Female Gonads	5.3 ± 0.2	1.4
Carcass	4.4 ± 0.9	1.2	6.1 ± 2.2	1.4

Whole Body	3.8 ± 0.4		4.3 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033318-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033318	5.6 ± 0.5	4.0 ± 0.3	1.9 ± 0.3	1.6 ± 0.2

TC033318-RA	5.6 ± 0.5	4.0 ± 0.3	1.9 ± 0.3	1.6 ± 0.2