BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033682

Symbol
kappaBs

Product
NF-kappa-B inhibitor-interacting Ras-like protein

NCBI Equivalent
662855

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.3 ± 0.3	1.8	5.2 ± 0.6	1.5
Brain	10 ± 1.2	3.5	8.8 ± 0.9	2.5
Anterior Midgut	1.8 ± 0.6	0.6	3.1 ± 1.0	0.9
Posterior Midgut	2.5 ± 0.7	0.9	4.0 ± 0.8	1.1
Hindgut	8.7 ± 2.3	3.0	5.8 ± 0.8	1.7
Tubules (Free)	4.2 ± 1.0	1.5	4.1 ± 0.5	1.2
Perirectal Tubules	7.2 ± 0.6	2.5
Rectum	5.5 ± 0.7	1.9
Rectal complex	7.5 ± 0.6	2.6	6.4 ± 1.1	1.8
Fat Body	4.2 ± 0.3	1.5	4.2 ± 1.0	1.2
Male Gonads	6.2 ± 0.9	2.1
Female Gonads	12 ± 2.9	4.3
Carcass	4.9 ± 1.1	1.7	6.4 ± 0.9	1.8

Whole Body	2.9 ± 0.6		3.5 ± 0.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033682-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033682	45 ± 2.9	17 ± 0.4	18 ± 2.3	20 ± 4.3

TC033682-RA	45 ± 2.9	17 ± 0.4	18 ± 2.3	20 ± 4.3