BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033734

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.5 ± 0.3	0.5	3.0 ± 1.7	0.8
Brain	0.9 ± 0.1	0.2	0.3 ± 0.2	0.1
Anterior Midgut	0.1 ± 0.0	0.0	0.1 ± 0.1	0.0
Posterior Midgut	0.1 ± 0.0	0.0	0.2 ± 0.0	0.1
Hindgut	3.9 ± 0.2	0.7	13 ± 8.9	3.5
Tubules (Free)	0.1 ± 0.1	0.0	0.3 ± 0.2	0.1
Perirectal Tubules	0.4 ± 0.1	0.1
Rectum	0.5 ± 0.2	0.1
Rectal complex	0.8 ± 0.3	0.2	16 ± 16	4.4
Fat Body	4.2 ± 3.0	0.8	0.6 ± 0.3	0.2
Male Gonads	61 ± 41	12
Female Gonads	2.7 ± 0.4	0.5
Carcass	10 ± 5.7	2.0	5.4 ± 5.0	1.5

Whole Body	5.2 ± 2.6		3.6 ± 0.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033734-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033734	18 ± 4.0	8.9 ± 1.6	2.9 ± 0.7	252 ± 56

TC033734-RA	18 ± 4.0	8.9 ± 1.6	2.9 ± 0.7	252 ± 56