BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC033818

Symbol
cactin

Product
Cactin-like Protein

NCBI Equivalent
664553

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.3 ± 0.5	0.9	5.8 ± 0.6	1.2
Brain	3.8 ± 0.2	0.8	4.2 ± 0.3	0.9
Anterior Midgut	3.3 ± 0.7	0.7	4.0 ± 0.4	0.8
Posterior Midgut	3.4 ± 0.2	0.7	4.7 ± 0.2	1.0
Hindgut	4.2 ± 0.8	0.9	5.2 ± 1.2	1.1
Tubules (Free)	7.9 ± 0.1	1.6	6.9 ± 0.6	1.4
Perirectal Tubules	9.8 ± 0.6	2.0
Rectum	7.3 ± 0.6	1.5
Rectal complex	10 ± 0.6	2.1	8.4 ± 0.9	1.7
Fat Body	3.7 ± 0.7	0.8	3.0 ± 0.4	0.6
Male Gonads	4.7 ± 1.1	1.0
Female Gonads	3.2 ± 0.2	0.7
Carcass	4.1 ± 0.2	0.8	3.3 ± 0.6	0.7

Whole Body	4.9 ± 0.6		4.8 ± 0.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC033818-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC033818	4.3 ± 0.4	4.2 ± 0.2	4.0 ± 0.2	3.2 ± 0.4

TC033818-RA	4.3 ± 0.4	4.2 ± 0.2	4.0 ± 0.2	3.2 ± 0.4