BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034001

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	341 ± 111	6.0	1396 ± 251	3.9
Brain	0.6 ± 0.3	0.0	5.9 ± 2.7	0.0
Anterior Midgut	7.5 ± 5.4	0.1	13 ± 3.5	0.0
Posterior Midgut	10 ± 5.8	0.2	8.9 ± 2.7	0.0
Hindgut	90 ± 56	1.6	101 ± 16	0.3
Tubules (Free)	18 ± 0.6	0.3	11 ± 1.5	0.0
Perirectal Tubules	40 ± 55	0.7
Rectum	136 ± 33	2.4
Rectal complex	233 ± 18	4.1	152 ± 23	0.4
Fat Body	12 ± 13	0.2	0.5 ± 0.3	0.0
Male Gonads	5.0 ± 3.3	0.1
Female Gonads	1.2 ± 1.1	0.0
Carcass	612 ± 82	11	1757 ± 1364	5.0

Whole Body	56 ± 13		354 ± 309

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034001-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034001	0.2 ± 0.3	0.1 ± 0.1	0.1 ± 0.1	11 ± 3.8

TC034001-RA	0.2 ± 0.3	0.1 ± 0.1	0.1 ± 0.1	11 ± 3.8