BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034010

Symbol
LOC107398423

Product
Lysozyme 1-like Protein

NCBI Equivalent
107398423

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	47 ± 6.7	8.2	250 ± 8.0	1.9
Brain	0.5 ± 0.1	0.1	12 ± 0.8	0.1
Anterior Midgut	0.4 ± 0.1	0.1	2.0 ± 0.8	0.0
Posterior Midgut	0.6 ± 0.3	0.1	2.8 ± 0.6	0.0
Hindgut	30 ± 4.9	5.3	273 ± 188	2.1
Tubules (Free)	0.2 ± 0.1	0.0	1.1 ± 0.4	0.0
Perirectal Tubules	19 ± 22	3.3
Rectum	61 ± 14	11
Rectal complex	26 ± 2.7	4.5	114 ± 11	0.9
Fat Body	4.4 ± 0.7	0.8	13 ± 7.5	0.1
Male Gonads	0.6 ± 0.5	0.1
Female Gonads	15 ± 3.8	2.6
Carcass	511 ± 319	90	2020 ± 994	15

Whole Body	5.7 ± 0.7		132 ± 64

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034010-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034010	102 ± 20	345 ± 33	1376 ± 449	738 ± 208

TC034010-RA	102 ± 20	345 ± 33	1376 ± 449	738 ± 208