BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034046

Symbol
LOC658297

NCBI Equivalent
658297

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	6.9 ± 1.1	3.4	14 ± 1.6	3.0
Brain	8.6 ± 1.0	4.3	4.9 ± 0.4	1.0
Anterior Midgut	0.2 ± 0.1	n.a.	0.4 ± 0.2	0.1
Posterior Midgut	0.3 ± 0.1	n.a.	0.4 ± 0.1	0.1
Hindgut	1.8 ± 0.3	n.a.	2.2 ± 0.1	0.5
Tubules (Free)	0.3 ± 0.0	n.a.	0.2 ± 0.1	0.1
Perirectal Tubules	1.4 ± 0.3	n.a.
Rectum	1.9 ± 0.3	n.a.
Rectal complex	1.7 ± 0.2	n.a.	1.3 ± 0.1	0.3
Fat Body	0.4 ± 0.1	n.a.	0.1 ± 0.1	0.0
Male Gonads	0.3 ± 0.0	n.a.
Female Gonads	0.2 ± 0.1	n.a.
Carcass	5.8 ± 1.0	2.9	37 ± 10	7.9

Whole Body	0.8 ± 0.0		4.7 ± 2.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034046-RA
TC034046-RB
TC034046-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034046	0.3 ± 0.1	0.3 ± 0.0	0.2 ± 0.0	7.2 ± 0.5

TC034046-RA	0.1 ± 0.1	0.2 ± 0.2	0.1 ± 0.1	3.9 ± 2.0
TC034046-RB	0.2 ± 0.1	0.1 ± 0.2	0.1 ± 0.1	3.3 ± 1.8
TC034046-RC	0.0 ± 0.0	0.0 ± 0.1	0.0 ± 0.0	0.0 ± 0.0