BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034063

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.4 ± 0.1	0.2	3.1 ± 1.2	0.2
Brain	0.0 ± 0.0	0.0	0.1 ± 0.1	0.0
Anterior Midgut	2.5 ± 0.2	1.1	10 ± 8.6	0.7
Posterior Midgut	2.1 ± 0.5	0.9	2.0 ± 1.8	0.1
Hindgut	2.6 ± 2.1	1.1	7.9 ± 3.7	0.5
Tubules (Free)	6.2 ± 0.8	2.7	8.5 ± 1.7	0.6
Perirectal Tubules	876 ± 321	382
Rectum	15 ± 3.7	6.6
Rectal complex	367 ± 3.4	160	261 ± 39	18
Fat Body	0.2 ± 0.0	0.1	2.8 ± 1.6	0.2
Male Gonads	0.6 ± 0.2	0.3
Female Gonads	0.2 ± 0.2	0.1
Carcass	1.0 ± 0.4	0.4	6.2 ± 4.1	0.4

Whole Body	2.3 ± 0.1		14 ± 15

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034063-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034063	0.2 ± 0.1	4.3 ± 0.6	2.1 ± 0.5	2.4 ± 0.5

TC034063-RA	0.2 ± 0.1	4.3 ± 0.6	2.1 ± 0.5	2.4 ± 0.5