BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034275

Symbol
LOC657055

Product
Elongation of very long chain fatty acids protein AAEL008004-like Protein

NCBI Equivalent
657055

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	142 ± 9.9	13	60 ± 30	2.8
Brain	0.2 ± 0.0	0.0	1.6 ± 0.9	0.1
Anterior Midgut	0.0 ± 0.1	0.0	0.0 ± 0.0	0.0
Posterior Midgut	0.1 ± 0.1	0.0	0.0 ± 0.1	0.0
Hindgut	46 ± 30	4.3	20 ± 3.3	0.9
Tubules (Free)	0.0 ± 0.0	0.0	0.0 ± 0.1	0.0
Perirectal Tubules	3.8 ± 4.8	0.4
Rectum	16 ± 2.1	1.5
Rectal complex	7.2 ± 1.3	0.7	13 ± 9.3	0.6
Fat Body	1.2 ± 1.0	0.1	0.3 ± 0.1	0.0
Male Gonads	0.8 ± 0.3	0.1
Female Gonads	1.5 ± 0.3	0.1
Carcass	60 ± 23	5.6	41 ± 18	1.9

Whole Body	11 ± 2.5		22 ± 1.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034275-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034275	1.0 ± 0.1	16 ± 1.5	11 ± 1.1	5.6 ± 0.5

TC034275-RA	1.0 ± 0.1	16 ± 1.5	11 ± 1.1	5.6 ± 0.5