BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034302

Symbol
LOC100142550

NCBI Equivalent
100142550

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.9 ± 0.8	2.3	30 ± 3.8	2.1
Brain	4.4 ± 0.3	1.3	6.4 ± 0.7	0.4
Anterior Midgut	0.6 ± 0.1	0.2	1.1 ± 0.1	0.1
Posterior Midgut	0.7 ± 0.2	0.2	1.9 ± 0.2	0.1
Hindgut	11 ± 1.6	3.2	26 ± 4.3	1.7
Tubules (Free)	1.3 ± 0.3	0.4	1.8 ± 0.2	0.1
Perirectal Tubules	4.2 ± 1.5	1.2
Rectum	11 ± 1.0	3.3
Rectal complex	7.6 ± 1.3	2.2	13 ± 2.7	0.9
Fat Body	4.8 ± 1.4	1.4	14 ± 2.9	1.0
Male Gonads	4.8 ± 0.4	1.4
Female Gonads	4.8 ± 1.4	1.4
Carcass	19 ± 1.9	5.6	54 ± 22	3.7

Whole Body	3.4 ± 0.1		15 ± 5.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034302-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034302	9.6 ± 0.6	9.8 ± 1.1	17 ± 1.2	27 ± 8.4

TC034302-RA	9.6 ± 0.6	9.8 ± 1.1	17 ± 1.2	27 ± 8.4