BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034352

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	53 ± 3.0	5.8	8.6 ± 2.1	1.2
Brain	269 ± 5.8	29	120 ± 19	17
Anterior Midgut	12 ± 2.2	1.3	11 ± 0.8	1.5
Posterior Midgut	12 ± 0.4	1.3	14 ± 1.6	2.0
Hindgut	18 ± 10	2.0	13 ± 1.0	1.8
Tubules (Free)	0.7 ± 0.2	0.1	1.2 ± 0.3	0.2
Perirectal Tubules	9.9 ± 0.8	1.1
Rectum	19 ± 15	2.1
Rectal complex	7.7 ± 0.5	0.8	6.8 ± 0.8	1.0
Fat Body	10 ± 3.2	1.1	12 ± 2.6	1.7
Male Gonads	11 ± 1.1	1.2
Female Gonads	3.0 ± 0.7	0.3
Carcass	18 ± 2.5	1.9	14 ± 3.6	2.0

Whole Body	9.1 ± 1.4		7.1 ± 0.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034352-RA
TC034352-RB
TC034352-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034352	4.5 ± 0.5	5.8 ± 1.2	11 ± 2.3	24 ± 1.9

TC034352-RA	0.0 ± 0.0	0.5 ± 0.2	0.6 ± 1.0	0.8 ± 0.5
TC034352-RB	0.1 ± 0.1	0.0 ± 0.1	0.3 ± 0.6	9.9 ± 1.4
TC034352-RC	4.5 ± 0.4	5.2 ± 1.1	10.0 ± 1.9	13 ± 1.7