BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034622

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	40 ± 3.5	7.6	6.6 ± 1.6	1.2
Brain	254 ± 12	48	139 ± 11	24
Anterior Midgut	4.6 ± 1.0	0.9	12 ± 1.9	2.1
Posterior Midgut	4.6 ± 0.4	0.9	11 ± 2.0	1.9
Hindgut	9.6 ± 14	1.8	1.7 ± 0.3	0.3
Tubules (Free)	19 ± 1.2	3.5	19 ± 2.7	3.4
Perirectal Tubules	5.4 ± 0.8	1.0
Rectum	5.0 ± 0.7	0.9
Rectal complex	7.9 ± 0.7	1.5	8.1 ± 1.8	1.4
Fat Body	11 ± 3.3	2.2	4.9 ± 2.8	0.9
Male Gonads	2.1 ± 1.1	0.4
Female Gonads	0.8 ± 0.2	0.1
Carcass	7.1 ± 2.8	1.3	5.1 ± 2.2	0.9

Whole Body	5.3 ± 0.8		5.7 ± 0.7

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034622-RA
TC034622-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034622	1.0 ± 0.2	0.7 ± 0.0	0.4 ± 0.2	4.0 ± 1.1

TC034622-RA	0.3 ± 0.1	0.1 ± 0.2	0.0 ± 0.0	1.0 ± 0.6
TC034622-RB	0.7 ± 0.2	0.6 ± 0.2	0.4 ± 0.2	3.0 ± 0.6