BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034643

Symbol
san

Product
Probable N-acetyltransferase san-like protein

NCBI Equivalent
107397753

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	23 ± 4.1	0.6	29 ± 1.6	1.3
Brain	17 ± 0.7	0.4	23 ± 4.4	1.0
Anterior Midgut	80 ± 2.4	2.0	42 ± 6.5	1.9
Posterior Midgut	88 ± 9.2	2.2	40 ± 2.6	1.8
Hindgut	32 ± 7.6	0.8	20 ± 1.9	0.9
Tubules (Free)	24 ± 1.1	0.6	24 ± 3.8	1.1
Perirectal Tubules	37 ± 5.2	0.9
Rectum	37 ± 2.0	0.9
Rectal complex	23 ± 1.6	0.6	25 ± 1.2	1.1
Fat Body	39 ± 4.0	1.0	36 ± 21	1.6
Male Gonads	85 ± 32	2.1
Female Gonads	35 ± 2.2	0.9
Carcass	28 ± 4.6	0.7	48 ± 10	2.1

Whole Body	41 ± 2.5		23 ± 5.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034643-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034643	166 ± 18	232 ± 12	202 ± 33	113 ± 21

TC034643-RA	166 ± 18	232 ± 12	202 ± 33	113 ± 21