BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034652

Symbol
LOC103312627

NCBI Equivalent
103312627

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.3 ± 0.7	2.2	1.9 ± 0.7	0.6
Brain	0.4 ± 0.0	n.a.	0.4 ± 0.1	0.1
Anterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Posterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.0	0.0
Hindgut	3.1 ± 1.5	1.6	0.9 ± 0.2	0.3
Tubules (Free)	0.0 ± 0.0	n.a.	0.0 ± 0.0	0.0
Perirectal Tubules	0.5 ± 0.8	n.a.
Rectum	2.6 ± 0.7	1.3
Rectal complex	1.2 ± 0.3	n.a.	0.3 ± 0.1	0.1
Fat Body	0.2 ± 0.1	n.a.	0.3 ± 0.2	0.1
Male Gonads	0.2 ± 0.1	n.a.
Female Gonads	0.6 ± 0.2	n.a.
Carcass	1.6 ± 1.0	n.a.	3.1 ± 0.8	1.0

Whole Body	1.0 ± 0.1		3.1 ± 1.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034652-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034652	2.3 ± 0.2	1.4 ± 0.2	0.2 ± 0.1	0.1 ± 0.1

TC034652-RA	2.3 ± 0.2	1.4 ± 0.2	0.2 ± 0.1	0.1 ± 0.1