BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC034995

Symbol
LOC657306

Product
Phosphatidylcholine:ceramide cholinephosphotransferase 1-like protein

NCBI Equivalent
657306

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	29 ± 1.5	1.1	20 ± 5.2	0.6
Brain	27 ± 1.2	1.0	32 ± 4.5	0.9
Anterior Midgut	2.0 ± 0.1	0.1	4.0 ± 0.6	0.1
Posterior Midgut	1.9 ± 0.2	0.1	4.1 ± 0.1	0.1
Hindgut	50 ± 14	1.9	90 ± 2.3	2.6
Tubules (Free)	46 ± 1.9	1.7	88 ± 13	2.5
Perirectal Tubules	95 ± 27	3.6
Rectum	57 ± 2.0	2.1
Rectal complex	46 ± 5.0	1.7	42 ± 3.5	1.2
Fat Body	39 ± 3.3	1.5	115 ± 51	3.2
Male Gonads	41 ± 4.2	1.5
Female Gonads	42 ± 5.7	1.6
Carcass	101 ± 72	3.8	44 ± 7.0	1.2

Whole Body	27 ± 3.3		35 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC034995-RA
TC034995-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC034995	6.9 ± 1.1	4.9 ± 0.5	2.9 ± 0.5	2.4 ± 0.1

TC034995-RA	6.8 ± 1.1	4.7 ± 0.4	2.8 ± 0.5	2.3 ± 0.1
TC034995-RB	0.0 ± 0.0	0.2 ± 0.1	0.1 ± 0.0	0.1 ± 0.1