BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Atn)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC003397

Symbol

Product
Protein retinal degeneration B-like Protein

iBeetle-Base
TC003397

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	19 ± 0.9	3.7	3.5 ± 0.4	0.9
Brain	18 ± 11	3.5	12 ± 2.5	3.2
Anterior Midgut	0.8 ± 0.2	0.2	1.5 ± 0.3	0.4
Posterior Midgut	0.9 ± 0.3	0.2	1.9 ± 0.2	0.5
Hindgut	4.2 ± 0.6	0.8	11 ± 3.1	2.9
Tubule	6.9 ± 0.9	1.4	6.8 ± 0.5	1.8
Rectal complex	19 ± 4.8	3.7	16 ± 3.4	4.4
Fat Body	1.2 ± 0.3	0.2	0.7 ± 0.4	0.2
Male Gonads	1.4 ± 0.4	0.3
Female Gonads	0.7 ± 0.2	0.1
Carcass	2.1 ± 1.0	0.4	0.9 ± 0.1	0.2

WholeBody	5.1 ± 0.5		3.7 ± 1.4

Rotate to see Transcript Table

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC003397-RA
TC003397-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC003397	0.5 ± 0.0	0.4 ± 0.1	0.5 ± 0.1	0.5 ± 0.1

TC003397-RA	0.5 ± 0.0	0.3 ± 0.1	0.4 ± 0.2	0.0 ± 0.1
TC003397-RB	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.4 ± 0.1