BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Atn)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC007008

Symbol

Product
Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme-like Protein

iBeetle-Base
TC007008

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	10.0 ± 0.4	0.2	2.0 ± 0.8	0.4
Brain	7.4 ± 0.9	0.2	5.5 ± 0.1	1.2
Anterior Midgut	3.2 ± 0.6	0.1	3.5 ± 0.8	0.8
Posterior Midgut	2.7 ± 0.8	0.1	3.7 ± 0.9	0.8
Hindgut	7.6 ± 2.6	0.2	4.6 ± 0.7	1.0
Tubule	10 ± 1.3	0.2	9.0 ± 0.6	2.0
Rectal complex	2.8 ± 1.1	0.1	2.5 ± 0.5	0.6
Fat Body	120 ± 61	2.5	4.7 ± 0.8	1.1
Male Gonads	361 ± 50	7.4
Female Gonads	5.4 ± 0.5	0.1
Carcass	10 ± 6.5	0.2	5.1 ± 0.2	1.1

WholeBody	49 ± 9.6		4.4 ± 3.2

Rotate to see Transcript Table

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007008-RA
TC007008-RB
TC007008-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007008	18 ± 2.9	9.1 ± 0.4	8.4 ± 0.4	5.8 ± 1.3

TC007008-RA	3.1 ± 0.1	2.2 ± 0.2	3.2 ± 0.7	2.2 ± 0.4
TC007008-RB	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.0 ± 0.0
TC007008-RC	15 ± 2.9	6.8 ± 0.2	5.2 ± 0.3	3.6 ± 1.2