BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC010660

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 0.1	0.1	4.5 ± 0.1	1.6
Brain	3.1 ± 0.0	0.1	2.9 ± 0.2	1.1
Anterior Midgut	2.1 ± 0.3	0.1	2.2 ± 0.1	0.8
Posterior Midgut	2.3 ± 0.3	0.1	2.3 ± 0.6	0.8
Hindgut	2.4 ± 0.5	0.1	1.9 ± 0.3	0.7
Tubules (Free)	2.7 ± 0.2	0.1	2.2 ± 0.2	0.8
Perirectal Tubules	3.0 ± 0.4	0.1
Rectum	2.9 ± 0.2	0.1
Rectal complex	3.4 ± 0.3	0.1	2.7 ± 0.1	1.0
Fat Body	34 ± 13	1.1	2.1 ± 0.9	0.8
Male Gonads	86 ± 6.2	2.9
Female Gonads	6.4 ± 0.3	0.2
Carcass	3.3 ± 1.4	0.1	1.8 ± 0.5	0.7

Whole Body	30 ± 5.9		2.8 ± 0.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC010660-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC010660	6.9 ± 0.8	4.3 ± 0.6	4.0 ± 0.6	3.5 ± 0.2

TC010660-RA	6.9 ± 0.8	4.3 ± 0.6	4.0 ± 0.6	3.5 ± 0.2