BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Atn)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC015513

Symbol

Product
rhomboid-4

iBeetle-Base
TC015513

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.6 ± 0.6	0.2	2.7 ± 0.9	0.2
Brain	0.0 ± 0.0	0.0	0.1 ± 0.1	0.0
Anterior Midgut	402 ± 37	37	315 ± 17	28
Posterior Midgut	392 ± 16	36	190 ± 13	17
Hindgut	1.7 ± 0.6	0.2	0.9 ± 0.3	0.1
Tubule	1.4 ± 0.2	0.1	1.1 ± 0.4	0.1
Rectal complex	0.6 ± 0.2	0.1	1.2 ± 0.6	0.1
Fat Body	3.3 ± 1.4	0.3	0.7 ± 0.3	0.1
Male Gonads	1.9 ± 0.6	0.2
Female Gonads	1.8 ± 0.2	0.2
Carcass	1.7 ± 0.7	0.2	0.9 ± 0.3	0.1

WholeBody	11 ± 1.8		11 ± 3.4

Rotate to see Transcript Table

Adult & Larval Transcript FPKMs

Transcript	Adult											Larval
	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC015513-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC015513	0.6 ± 0.1	0.5 ± 0.2	0.1 ± 0.0	0.5 ± 0.1

TC015513-RA	0.6 ± 0.1	0.5 ± 0.2	0.1 ± 0.0	0.5 ± 0.1