FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 aly
Name
 always early
Annotation Symbol
 CG2075
FlyBase ID
FBgn0004372
Paralogues
 Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Eye0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Brain / CNS0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Thoracicoabdominal ganglion0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Crop0.0 ± 0.1N.A.0.0 ± 0.0N.A.1.00n.s.  
Midgut0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Hindgut0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Malpighian Tubules0.1 ± 0.1N.A.0.0 ± 0.1N.A.1.00n.s.0.0 ± 0.0N.A.
Rectal pad0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Salivary gland0.0 ± 0.1N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Fat body0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.5 ± 0.4N.A.
Heart0.1 ± 0.1N.A.0.0 ± 0.0N.A.1.00n.s.  
Trachea      0.0 ± 0.0N.A.
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  0.1 ± 0.1N.A.    
Mated Spermatheca  0.0 ± 0.0N.A.    
Testis10 ± 0.65.1      
Accessory glands0.0 ± 0.0N.A.      
Carcass0.3 ± 0.3N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Garland cells      0.0 ± 0.0N.A.
Whole body0.9 ± 0.30.0 ± 0.01.00p < 0.050.3 ± 0.1
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View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0073006
RBFBtr0332086
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.