FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
brat
Name
brain tumor
Annotation Symbol
CG10719
FlyBase ID
FBgn0010300
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head9.4 ± 0.82.67.7 ± 0.90.31.23n.s.  
Eye4.5 ± 0.51.34.3 ± 0.30.21.04n.s.  
Brain / CNS13 ± 0.13.512 ± 2.70.51.05n.s.58 ± 149.1
Thoracicoabdominal ganglion6.4 ± 1.01.88.0 ± 0.30.30.80n.s.  
Crop2.2 ± 0.20.63.3 ± 1.10.10.67n.s.  
Midgut3.5 ± 0.11.01.7 ± 0.20.11.76p < 0.016.7 ± 1.01.1
Hindgut1.6 ± 0.40.41.8 ± 0.10.11.00n.s.1.9 ± 0.40.3
Malpighian Tubules3.8 ± 0.41.13.7 ± 0.80.11.04n.s.1.3 ± 0.30.2
Fat body0.9 ± 0.20.23.5 ± 0.40.10.57p < 0.013.6 ± 0.90.6
Salivary gland3.2 ± 0.60.911 ± 6.30.50.28n.s.3.4 ± 0.40.5
Heart2.2 ± 0.50.618 ± 220.70.12n.s.  
Trachea      10 ± 2.81.6
Ovary  35 ± 0.91.4    
Virgin Spermatheca  6.8 ± 1.50.3    
Mated Spermatheca  6.5 ± 1.10.3    
Testis3.6 ± 0.21.0      
Accessory glands11 ± 0.43.0      
Carcass1.6 ± 0.30.54.8 ± 2.50.20.41n.s.8.2 ± 0.31.3
Rectal pad0.8 ± 0.10.22.0 ± 0.20.11.00n.s.  
Garland cells      14 ± 4.52.2
Whole body3.6 ± 0.425 ± 4.00.14p < 0.056.3 ± 1.8
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0081158
RBFBtr0081159
RCFBtr0081160
REFBtr0336627
RFFBtr0344846
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.