FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
sqz
Name
squeeze
Annotation Symbol
CG5557
FlyBase ID
FBgn0010768
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head1.6 ± 0.2N.A.1.5 ± 0.40.51.00n.s.  
Eye1.9 ± 0.3N.A.1.7 ± 0.00.51.00n.s.  
Brain / CNS2.5 ± 0.21.22.3 ± 0.40.71.09n.s.2.9 ± 0.11.5
Thoracicoabdominal ganglion1.7 ± 0.2N.A.2.1 ± 0.20.70.97n.s.  
Crop0.8 ± 0.2N.A.1.2 ± 0.30.41.00n.s.  
Midgut0.5 ± 0.2N.A.0.2 ± 0.00.11.00n.s.0.5 ± 0.1N.A.
Hindgut0.3 ± 0.1N.A.0.4 ± 0.10.11.00n.s.0.6 ± 0.1N.A.
Malpighian Tubules0.5 ± 0.2N.A.0.7 ± 0.10.21.00n.s.0.5 ± 0.1N.A.
Fat body0.2 ± 0.1N.A.0.4 ± 0.10.11.00n.s.0.5 ± 0.1N.A.
Salivary gland0.5 ± 0.1N.A.1.2 ± 0.80.41.00n.s.0.6 ± 0.1N.A.
Heart0.6 ± 0.3N.A.2.3 ± 1.80.70.87n.s.  
Trachea      2.9 ± 0.61.4
Ovary  4.0 ± 0.31.3    
Virgin Spermatheca  0.6 ± 0.10.2    
Mated Spermatheca  0.5 ± 0.20.2    
Testis0.3 ± 0.1N.A.      
Accessory glands0.2 ± 0.1N.A.      
Carcass0.7 ± 0.1N.A.0.9 ± 0.40.31.00n.s.1.4 ± 0.3N.A.
Rectal pad0.3 ± 0.1N.A.0.4 ± 0.00.11.00n.s.  
Garland cells      2.0 ± 0.21.0
Whole body0.7 ± 0.23.1 ± 0.50.64p < 0.010.7 ± 0.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0083733
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.