FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Mmp1
Name
Matrix metalloproteinase 1
Annotation Symbol
CG4859
FlyBase ID
FBgn0035049
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head12 ± 7.51.18.8 ± 0.22.21.40n.s.  
Eye6.8 ± 0.90.64.7 ± 0.21.21.45n.s.  
Brain / CNS1.7 ± 0.10.12.1 ± 0.10.50.97p < 0.051.9 ± 0.70.2
Thoracicoabdominal ganglion8.0 ± 1.00.78.4 ± 0.52.10.95n.s.  
Crop4.2 ± 0.80.46.8 ± 0.91.70.62n.s.  
Midgut30 ± 4.02.629 ± 2.27.31.00n.s.23 ± 4.52.8
Hindgut21 ± 2.11.920 ± 3.44.91.07n.s.6.5 ± 2.30.8
Malpighian Tubules29 ± 5.32.529 ± 8.77.20.99n.s.19 ± 4.72.3
Rectal pad12 ± 0.91.017 ± 2.34.30.68n.s.  
Salivary gland4.2 ± 0.90.42.0 ± 0.10.52.1n.s.0.6 ± 0.10.1
Fat body5.6 ± 1.20.54.5 ± 0.81.11.24n.s.1.2 ± 1.00.1
Heart4.8 ± 0.40.44.0 ± 2.11.01.19n.s.  
Trachea      67 ± 408.0
Ovary  0.4 ± 0.20.1    
Virgin Spermatheca  3.9 ± 0.51.0    
Mated Spermatheca  4.0 ± 0.91.0    
Testis8.4 ± 2.90.7      
Accessory glands1.8 ± 0.20.2      
Carcass7.6 ± 1.30.74.6 ± 0.61.11.64p < 0.054.1 ± 1.60.5
Garland cells      22 ± 4.12.7
Whole body12 ± 1.24.0 ± 0.72.8p < 0.018.3 ± 1.6
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RCFBtr0273263
RDFBtr0273264
REFBtr0304005
RFFBtr0304006
RGFBtr0304007
RHFBtr0304008
RIFBtr0304009
RJFBtr0304010
RKFBtr0304011
RLFBtr0306656
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.