FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Mmp1
Name
Matrix metalloproteinase 1
Annotation Symbol
CG4859
FlyBase ID
FBgn0035049
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head12 ± 7.41.18.2 ± 0.42.21.43n.s.  
Eye6.0 ± 0.80.64.2 ± 0.21.11.45n.s.  
Brain / CNS1.5 ± 0.10.11.9 ± 0.10.51.00p < 0.051.7 ± 0.60.2
Thoracicoabdominal ganglion7.2 ± 1.10.77.5 ± 0.32.00.95n.s.  
Crop3.8 ± 0.50.36.2 ± 0.61.70.60n.s.  
Midgut26 ± 3.22.421 ± 2.95.61.25n.s.22 ± 4.12.9
Hindgut19 ± 1.31.715 ± 2.24.01.28n.s.5.2 ± 2.60.7
Malpighian Tubules24 ± 7.72.225 ± 7.86.90.95n.s.15 ± 3.72.0
Fat body4.7 ± 1.10.43.5 ± 0.70.91.35n.s.1.1 ± 0.80.1
Salivary gland3.8 ± 0.90.41.8 ± 0.10.51.91n.s.0.5 ± 0.10.1
Heart4.3 ± 0.50.43.7 ± 1.91.01.19n.s.  
Trachea      59 ± 387.9
Ovary  0.4 ± 0.20.1    
Virgin Spermatheca  3.0 ± 0.50.8    
Mated Spermatheca  3.8 ± 1.31.0    
Testis7.4 ± 2.40.7      
Accessory glands1.6 ± 0.20.1      
Carcass6.5 ± 1.00.64.2 ± 0.71.11.56p < 0.053.2 ± 0.50.4
Rectal pad12 ± 1.21.117 ± 1.64.70.68n.s.  
Garland cells      23 ± 3.73.1
Whole body11 ± 0.93.7 ± 0.63.0p < 0.017.5 ± 1.3
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RCFBtr0273263
RDFBtr0273264
REFBtr0304005
RFFBtr0304006
RGFBtr0304007
RHFBtr0304008
RIFBtr0304009
RJFBtr0304010
RKFBtr0304011
RLFBtr0306656
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.