FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
cic
Name
capicua
Annotation Symbol
CG43122
FlyBase ID
FBgn0262582
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head12 ± 0.81.69.8 ± 2.30.81.25n.s.  
Eye7.5 ± 0.91.06.1 ± 0.30.51.23n.s.  
Brain / CNS8.6 ± 0.41.17.8 ± 1.40.61.10n.s.6.6 ± 0.62.5
Thoracicoabdominal ganglion7.8 ± 0.71.08.1 ± 0.70.60.97n.s.  
Crop6.7 ± 0.60.95.6 ± 2.20.41.19n.s.  
Midgut9.4 ± 1.01.24.1 ± 0.70.32.3p < 0.013.6 ± 0.51.3
Hindgut4.0 ± 0.30.53.9 ± 0.60.31.00n.s.2.5 ± 0.40.9
Malpighian Tubules3.4 ± 0.80.43.6 ± 0.80.30.95n.s.1.9 ± 0.30.7
Fat body9.1 ± 0.61.210 ± 0.50.80.89n.s.6.6 ± 0.72.5
Salivary gland7.1 ± 0.30.96.4 ± 1.40.51.11n.s.3.3 ± 0.21.2
Heart8.4 ± 2.61.112 ± 1.40.90.71n.s.  
Trachea      5.7 ± 0.82.2
Ovary  14 ± 0.71.1    
Virgin Spermatheca  10.0 ± 1.00.8    
Mated Spermatheca  12 ± 2.00.9    
Testis4.9 ± 1.80.6      
Accessory glands2.6 ± 0.20.3      
Carcass5.0 ± 0.70.66.0 ± 0.40.50.83n.s.3.3 ± 0.11.3
Rectal pad3.5 ± 0.10.53.3 ± 0.10.31.05n.s.  
Garland cells      8.1 ± 0.93.1
Whole body7.7 ± 0.613 ± 1.10.61p < 0.012.6 ± 0.4
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0305026
RBFBtr0305027
RCFBtr0305028
RDFBtr0305029
RGFBtr0334305
RHFBtr0334306
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.