BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
NCBI ID (e.g. 660394)
Gene Symbol (e.g. Mhc, LOC660130)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
TC ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

NCBI ID
662715

Symbol
Hs3st-B

Product
Heparan sulfate 3-O sulfotransferase-B

TC Equivalent
TC005759

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.0 ± 0.1	1.7	11 ± 1.5	2.0
Brain	13 ± 0.9	4.4	13 ± 0.5	2.3
Anterior Midgut	4.4 ± 0.7	1.5	6.7 ± 1.6	1.2
Posterior Midgut	4.8 ± 0.3	1.7	6.6 ± 0.3	1.2
Hindgut	4.5 ± 1.9	1.5	5.1 ± 1.0	0.9
Tubules (Free)	3.8 ± 0.5	1.3	6.3 ± 0.8	1.1
Perirectal Tubules	5.8 ± 0.4	2.0
Rectum	5.2 ± 0.2	1.8
Rectal complex	5.8 ± 0.3	2.0	5.5 ± 0.5	1.0
Fat Body	4.5 ± 1.5	1.5	15 ± 8.2	2.6
Male Gonads	2.1 ± 0.4	0.7
Female Gonads	13 ± 1.9	4.4
Carcass	9.2 ± 2.5	3.2	13 ± 5.3	2.3

Whole Body	2.9 ± 0.1		5.6 ± 1.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
XM_008198571.3
XM_015982727.2

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
662715	13 ± 0.3	5.9 ± 1.0	4.3 ± 0.4	7.9 ± 2.2

XM_008198571.3	13 ± 0.3	5.9 ± 1.0	4.3 ± 0.4	7.9 ± 2.2
XM_015982727.2	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0